Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CC1G_01891 | CC1G_02535 | A8N5W0 | A8NBS5 | DNA-directed RNA polymerase II polypeptide. | Transcription initiation factor TFIIE alpha subunit. | 0.982 |
CC1G_01891 | CC1G_04529 | A8N5W0 | A8N5F1 | DNA-directed RNA polymerase II polypeptide. | DNA-directed RNA polymerase II subunit. | 0.999 |
CC1G_01891 | CC1G_04740 | A8N5W0 | A8P2D9 | DNA-directed RNA polymerase II polypeptide. | Transcription initiation factor IIB. | 0.970 |
CC1G_01891 | CC1G_06442 | A8N5W0 | A8NU15 | DNA-directed RNA polymerase II polypeptide. | DNA-directed RNA polymerase I. | 0.999 |
CC1G_01891 | CC1G_09096 | A8N5W0 | A8P342 | DNA-directed RNA polymerase II polypeptide. | Uncharacterized protein. | 0.998 |
CC1G_01891 | CC1G_11216 | A8N5W0 | A8N115 | DNA-directed RNA polymerase II polypeptide. | PHD-type domain-containing protein. | 0.971 |
CC1G_01891 | CC1G_11229 | A8N5W0 | A8N128 | DNA-directed RNA polymerase II polypeptide. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
CC1G_01891 | CC1G_11509 | A8N5W0 | A8NHA9 | DNA-directed RNA polymerase II polypeptide. | Transcription initiation factor TFIID-1. | 0.987 |
CC1G_01891 | CC1G_14627 | A8N5W0 | D6RMV5 | DNA-directed RNA polymerase II polypeptide. | Uncharacterized protein. | 0.997 |
CC1G_01891 | CC1G_15845 | A8N5W0 | A8N2R8 | DNA-directed RNA polymerase II polypeptide. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
CC1G_02535 | CC1G_01891 | A8NBS5 | A8N5W0 | Transcription initiation factor TFIIE alpha subunit. | DNA-directed RNA polymerase II polypeptide. | 0.982 |
CC1G_02535 | CC1G_04529 | A8NBS5 | A8N5F1 | Transcription initiation factor TFIIE alpha subunit. | DNA-directed RNA polymerase II subunit. | 0.993 |
CC1G_02535 | CC1G_04740 | A8NBS5 | A8P2D9 | Transcription initiation factor TFIIE alpha subunit. | Transcription initiation factor IIB. | 0.971 |
CC1G_02535 | CC1G_06442 | A8NBS5 | A8NU15 | Transcription initiation factor TFIIE alpha subunit. | DNA-directed RNA polymerase I. | 0.994 |
CC1G_02535 | CC1G_09096 | A8NBS5 | A8P342 | Transcription initiation factor TFIIE alpha subunit. | Uncharacterized protein. | 0.992 |
CC1G_02535 | CC1G_11216 | A8NBS5 | A8N115 | Transcription initiation factor TFIIE alpha subunit. | PHD-type domain-containing protein. | 0.779 |
CC1G_02535 | CC1G_11229 | A8NBS5 | A8N128 | Transcription initiation factor TFIIE alpha subunit. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
CC1G_02535 | CC1G_11509 | A8NBS5 | A8NHA9 | Transcription initiation factor TFIIE alpha subunit. | Transcription initiation factor TFIID-1. | 0.989 |
CC1G_02535 | CC1G_14627 | A8NBS5 | D6RMV5 | Transcription initiation factor TFIIE alpha subunit. | Uncharacterized protein. | 0.996 |
CC1G_02535 | CC1G_15845 | A8NBS5 | A8N2R8 | Transcription initiation factor TFIIE alpha subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.986 |
page 1 of 6