STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_07846Uncharacterized protein. (2238 aa)    
Predicted Functional Partners:
CC1G_01785
Integral membrane protein sed5.
   
 0.963
CC1G_13714
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.923
CC1G_02936
Golgi reassembly stacking protein 2.
    
 0.853
CC1G_06871
Uncharacterized protein.
    
 0.805
CC1G_02462
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
     
 0.692
CC1G_11830
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
     
 0.676
CC1G_00017
Protein transporter SEC22; Belongs to the synaptobrevin family.
     
 0.660
CC1G_04692
Lectin.
     
 0.655
CC1G_00507
SLY1 protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.653
CC1G_05016
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.638
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.