STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_09464Uncharacterized protein. (1186 aa)    
Predicted Functional Partners:
CC1G_00659
60s ribosomal protein l21-a.
   
   0.605
CC1G_09955
60S ribosomal protein L2.
   
 
 0.555
CC1G_06778
Ribosomal protein L16a; Belongs to the universal ribosomal protein uL13 family.
   
   0.551
CC1G_14279
Uncharacterized protein.
   
   0.540
CC1G_00694
Mitochondrial ribosomal protein subunit L2.
   
 
 0.518
CC1G_00876
Ubiquitin.
    
  0.488
CC1G_07885
50S ribosomal protein L13.
   
   0.475
CC1G_11438
Uncharacterized protein; Belongs to the complex I LYR family.
    
 
 0.452
CC1G_22007
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
    
 
 0.451
CC1G_10110
Ubiquitin-carboxy extension protein fusion.
    
  0.414
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
Server load: low (12%) [HD]