STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_15022Uncharacterized protein. (474 aa)    
Predicted Functional Partners:
CC1G_01920
MMS2.
   
 0.957
CC1G_07385
Synoviolin 1 isoform b.
   
 0.955
CC1G_11931
PRKCSH domain-containing protein.
    
 0.955
CC1G_04184
Ubiquitin fusion degradation protein I.
   
 
 0.909
CC1G_13210
NPL4.
    
 
 0.901
CC1G_06255
Endoplasmic reticulum-Golgi intermediate compartment protein 2.
   
   0.874
CC1G_09879
Valosin-containing protein; Belongs to the AAA ATPase family.
   
 0.844
CC1G_01377
ATP-dependent Zn protease.
   
 0.844
CC1G_01871
Thioredoxin domain-containing protein.
   
 0.714
CC1G_05521
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.664
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.