STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_15178TKL/TKL-ccin protein kinase. (642 aa)    
Predicted Functional Partners:
CC1G_00282
Ubiquitin conjugating enzyme family protein.
   
 0.545
CC1G_13726
Ubiquitinating enzyme.
   
 0.545
CC1G_08279
Response regulator receiver domain-containing protein.
    
 0.526
CC1G_08281
HSF_DOMAIN domain-containing protein.
    
 0.526
CC1G_15192
AGC/PDK1 protein kinase.
  
 
  0.460
CC1G_06537
Uncharacterized protein.
   
 0.439
CC1G_01283
Crg1.
    
 0.420
CC1G_03190
Uncharacterized protein.
   
 0.412
CC1G_15579
Vacuolar protein-sorting protein BRO1.
    
 0.410
CC1G_01089
AGC/PKA protein kinase.
  
 
 0.405
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.