Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Ava_0419 | Ava_1105 | TPR repeat protein. | TPR repeat protein. | 0.627 |
Ava_0560 | Ava_1104 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.524 |
Ava_0560 | Ava_1105 | Conserved hypothetical protein. | TPR repeat protein. | 0.527 |
Ava_0560 | Ava_2331 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.699 |
Ava_0560 | Ava_2503 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.757 |
Ava_0560 | Ava_3473 | Conserved hypothetical protein. | TPR repeat protein. | 0.627 |
Ava_0560 | Ava_3725 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.667 |
Ava_0560 | Ava_4403 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.769 |
Ava_1103 | Ava_1104 | Von Willebrand factor, type A. | Conserved hypothetical protein. | 0.942 |
Ava_1103 | Ava_1105 | Von Willebrand factor, type A. | TPR repeat protein. | 0.875 |
Ava_1103 | Ava_2331 | Von Willebrand factor, type A. | Conserved hypothetical protein. | 0.673 |
Ava_1103 | Ava_2503 | Von Willebrand factor, type A. | Conserved hypothetical protein. | 0.535 |
Ava_1104 | Ava_0560 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.524 |
Ava_1104 | Ava_1103 | Conserved hypothetical protein. | Von Willebrand factor, type A. | 0.942 |
Ava_1104 | Ava_1105 | Conserved hypothetical protein. | TPR repeat protein. | 0.899 |
Ava_1104 | Ava_2331 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.729 |
Ava_1104 | Ava_2503 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.697 |
Ava_1104 | Ava_3473 | Conserved hypothetical protein. | TPR repeat protein. | 0.459 |
Ava_1104 | Ava_3725 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.582 |
Ava_1104 | Ava_4403 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.489 |
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