STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ava_2176Periplasmic Sensor Signal Transduction Histidine Kinase. (551 aa)    
Predicted Functional Partners:
Ava_1423
Response regulator receiver (CheY) and GAF domain protein.
 
 
   0.781
Ava_0662
Response regulator receiver (CheY) and GAF modulated Serine phosphatase.
 
 
 
 0.698
Ava_2239
Adenylate/guanylate cyclase.
 
 
 0.676
Ava_0238
Multi-component transcriptional regulator, winged helix family.
 
 
 0.653
Ava_2771
Multi-sensor hybrid histidine kinase.
 
 
0.588
Ava_1029
Multi-sensor hybrid histidine kinase.
 
 
 
 0.581
Ava_0064
Signal transduction histidine kinase.
 
 
 
 0.559
Ava_3975
Cache sensor hybrid histidine kinase.
   0.543
Ava_1564
Multi-sensor hybrid histidine kinase.
 
 
 
 0.533
Ava_4753
PAS/PAC sensor hybrid histidine kinase.
 
 
0.528
Your Current Organism:
Trichormus variabilis
NCBI taxonomy Id: 240292
Other names: Anabaena flos-aquae A-37, Anabaena flos-aquae UTCC 67, Anabaena sp. CCALA 007, Anabaena sp. PCC 7937, Anabaena variabilis ATCC 29413, Anabaena variabilis IAM M-204, Anabaena variabilis NIES-2095, Anabaena variabilis UTCC 105, Nostoc sp. PCC 7937, T. variabilis ATCC 29413, Trichormus variabilis ATCC 29413
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