Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_0229 | Ava_2183 | Ava_0229 | Ava_2183 | Tetratricopeptide TPR_3. | Peptidase C14, caspase catalytic subunit p20. | 0.460 |
Ava_0229 | Ava_2184 | Ava_0229 | Ava_2184 | Tetratricopeptide TPR_3. | Peptidase C14, caspase catalytic subunit p20. | 0.470 |
Ava_0229 | alaS | Ava_0229 | Ava_0226 | Tetratricopeptide TPR_3. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.415 |
Ava_1444 | Ava_2183 | Ava_1444 | Ava_2183 | TPR repeat protein. | Peptidase C14, caspase catalytic subunit p20. | 0.458 |
Ava_1444 | Ava_2184 | Ava_1444 | Ava_2184 | TPR repeat protein. | Peptidase C14, caspase catalytic subunit p20. | 0.521 |
Ava_1444 | alaS | Ava_1444 | Ava_0226 | TPR repeat protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.445 |
Ava_1493 | Ava_2183 | Ava_1493 | Ava_2183 | Small GTP-binding protein domain protein. | Peptidase C14, caspase catalytic subunit p20. | 0.502 |
Ava_1493 | Ava_2184 | Ava_1493 | Ava_2184 | Small GTP-binding protein domain protein. | Peptidase C14, caspase catalytic subunit p20. | 0.450 |
Ava_1493 | Ava_4825 | Ava_1493 | Ava_4825 | Small GTP-binding protein domain protein. | Tetratricopeptide TPR_3. | 0.421 |
Ava_2182 | Ava_2183 | Ava_2182 | Ava_2183 | Hypothetical protein. | Peptidase C14, caspase catalytic subunit p20. | 0.649 |
Ava_2182 | Ava_2184 | Ava_2182 | Ava_2184 | Hypothetical protein. | Peptidase C14, caspase catalytic subunit p20. | 0.629 |
Ava_2182 | Ava_4825 | Ava_2182 | Ava_4825 | Hypothetical protein. | Tetratricopeptide TPR_3. | 0.415 |
Ava_2183 | Ava_0229 | Ava_2183 | Ava_0229 | Peptidase C14, caspase catalytic subunit p20. | Tetratricopeptide TPR_3. | 0.460 |
Ava_2183 | Ava_1444 | Ava_2183 | Ava_1444 | Peptidase C14, caspase catalytic subunit p20. | TPR repeat protein. | 0.458 |
Ava_2183 | Ava_1493 | Ava_2183 | Ava_1493 | Peptidase C14, caspase catalytic subunit p20. | Small GTP-binding protein domain protein. | 0.502 |
Ava_2183 | Ava_2182 | Ava_2183 | Ava_2182 | Peptidase C14, caspase catalytic subunit p20. | Hypothetical protein. | 0.649 |
Ava_2183 | Ava_2184 | Ava_2183 | Ava_2184 | Peptidase C14, caspase catalytic subunit p20. | Peptidase C14, caspase catalytic subunit p20. | 0.851 |
Ava_2183 | Ava_3246 | Ava_2183 | Ava_3246 | Peptidase C14, caspase catalytic subunit p20. | Peptidase C14, caspase catalytic subunit p20. | 0.793 |
Ava_2183 | Ava_4825 | Ava_2183 | Ava_4825 | Peptidase C14, caspase catalytic subunit p20. | Tetratricopeptide TPR_3. | 0.419 |
Ava_2183 | Ava_4880 | Ava_2183 | Ava_4880 | Peptidase C14, caspase catalytic subunit p20. | Beta-lactamase-like protein. | 0.486 |
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