Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Ava_0272 | Ava_1318 | Conserved hypothetical protein. | Protein of unknown function DUF1499. | 0.493 |
Ava_0272 | Ava_1765 | Conserved hypothetical protein. | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | 0.495 |
Ava_0272 | Ava_2345 | Conserved hypothetical protein. | DedA. | 0.531 |
Ava_0272 | Ava_2355 | Conserved hypothetical protein. | Glycosyl transferase, family 2. | 0.978 |
Ava_0272 | Ava_2431 | Conserved hypothetical protein. | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | 0.588 |
Ava_0272 | Ava_2752 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.685 |
Ava_0272 | Ava_2775 | Conserved hypothetical protein. | DedA. | 0.700 |
Ava_0272 | Ava_3797 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.573 |
Ava_0272 | Ava_3799 | Conserved hypothetical protein. | Radical SAM. | 0.783 |
Ava_1318 | Ava_0272 | Protein of unknown function DUF1499. | Conserved hypothetical protein. | 0.493 |
Ava_1318 | Ava_2345 | Protein of unknown function DUF1499. | DedA. | 0.400 |
Ava_1318 | Ava_2355 | Protein of unknown function DUF1499. | Glycosyl transferase, family 2. | 0.432 |
Ava_1318 | Ava_2431 | Protein of unknown function DUF1499. | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | 0.538 |
Ava_1318 | Ava_2752 | Protein of unknown function DUF1499. | Conserved hypothetical protein. | 0.640 |
Ava_1318 | Ava_2775 | Protein of unknown function DUF1499. | DedA. | 0.591 |
Ava_1765 | Ava_0272 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | Conserved hypothetical protein. | 0.495 |
Ava_1765 | Ava_2355 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | Glycosyl transferase, family 2. | 0.471 |
Ava_1765 | Ava_2752 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | Conserved hypothetical protein. | 0.402 |
Ava_1765 | Ava_2775 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | DedA. | 0.403 |
Ava_2345 | Ava_0272 | DedA. | Conserved hypothetical protein. | 0.531 |
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