Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_0574 | Ava_3099 | Ava_0574 | Ava_3099 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.420 |
Ava_1579 | Ava_3099 | Ava_1579 | Ava_3099 | TonB box-like protein. | Conserved hypothetical protein. | 0.553 |
Ava_1579 | Ava_4895 | Ava_1579 | Ava_4895 | TonB box-like protein. | Conserved hypothetical protein. | 0.514 |
Ava_3099 | Ava_0574 | Ava_3099 | Ava_0574 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.420 |
Ava_3099 | Ava_1579 | Ava_3099 | Ava_1579 | Conserved hypothetical protein. | TonB box-like protein. | 0.553 |
Ava_3099 | Ava_3100 | Ava_3099 | Ava_3100 | Conserved hypothetical protein. | Aldo/keto reductase. | 0.553 |
Ava_3099 | Ava_3889 | Ava_3099 | Ava_3889 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.516 |
Ava_3099 | Ava_4461 | Ava_3099 | Ava_4461 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.441 |
Ava_3099 | Ava_4895 | Ava_3099 | Ava_4895 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.495 |
Ava_3099 | psbT | Ava_3099 | Ava_1506 | Conserved hypothetical protein. | Photosystem II protein PsbT; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. | 0.485 |
Ava_3100 | Ava_3099 | Ava_3100 | Ava_3099 | Aldo/keto reductase. | Conserved hypothetical protein. | 0.553 |
Ava_3889 | Ava_3099 | Ava_3889 | Ava_3099 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.516 |
Ava_3889 | Ava_4461 | Ava_3889 | Ava_4461 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.733 |
Ava_4461 | Ava_3099 | Ava_4461 | Ava_3099 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.441 |
Ava_4461 | Ava_3889 | Ava_4461 | Ava_3889 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.733 |
Ava_4461 | Ava_4895 | Ava_4461 | Ava_4895 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.449 |
Ava_4895 | Ava_1579 | Ava_4895 | Ava_1579 | Conserved hypothetical protein. | TonB box-like protein. | 0.514 |
Ava_4895 | Ava_3099 | Ava_4895 | Ava_3099 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.495 |
Ava_4895 | Ava_4461 | Ava_4895 | Ava_4461 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.449 |
psbT | Ava_3099 | Ava_1506 | Ava_3099 | Photosystem II protein PsbT; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. | Conserved hypothetical protein. | 0.485 |