Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_1946 | Ava_3075 | Ava_1946 | Ava_3075 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrinogen-III synthase. | 0.803 |
Ava_1946 | Ava_3297 | Ava_1946 | Ava_3297 | Porphobilinogen synthase; Belongs to the ALAD family. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.902 |
Ava_1946 | Ava_3474 | Ava_1946 | Ava_3474 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.973 |
Ava_1946 | Ava_4109 | Ava_1946 | Ava_4109 | Porphobilinogen synthase; Belongs to the ALAD family. | Amino acid adenylation. | 0.742 |
Ava_1946 | Ava_4834 | Ava_1946 | Ava_4834 | Porphobilinogen synthase; Belongs to the ALAD family. | Beta-ketoacyl synthase. | 0.742 |
Ava_1946 | hemA | Ava_1946 | Ava_3699 | Porphobilinogen synthase; Belongs to the ALAD family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.827 |
Ava_1946 | hemC | Ava_1946 | Ava_4774 | Porphobilinogen synthase; Belongs to the ALAD family. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.995 |
Ava_1946 | hemE | Ava_1946 | Ava_1788 | Porphobilinogen synthase; Belongs to the ALAD family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.654 |
Ava_1946 | hemL | Ava_1946 | Ava_4920 | Porphobilinogen synthase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | 0.987 |
Ava_3075 | Ava_1946 | Ava_3075 | Ava_1946 | uroporphyrinogen-III synthase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.803 |
Ava_3075 | Ava_3297 | Ava_3075 | Ava_3297 | uroporphyrinogen-III synthase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.821 |
Ava_3075 | Ava_3474 | Ava_3075 | Ava_3474 | uroporphyrinogen-III synthase. | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.940 |
Ava_3075 | hemA | Ava_3075 | Ava_3699 | uroporphyrinogen-III synthase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.716 |
Ava_3075 | hemC | Ava_3075 | Ava_4774 | uroporphyrinogen-III synthase. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.989 |
Ava_3075 | hemE | Ava_3075 | Ava_1788 | uroporphyrinogen-III synthase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.927 |
Ava_3075 | hemL | Ava_3075 | Ava_4920 | uroporphyrinogen-III synthase. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | 0.483 |
Ava_3297 | Ava_1946 | Ava_3297 | Ava_1946 | Porphobilinogen synthase; Belongs to the ALAD family. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.902 |
Ava_3297 | Ava_3075 | Ava_3297 | Ava_3075 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrinogen-III synthase. | 0.821 |
Ava_3297 | Ava_3474 | Ava_3297 | Ava_3474 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.973 |
Ava_3297 | Ava_4109 | Ava_3297 | Ava_4109 | Porphobilinogen synthase; Belongs to the ALAD family. | Amino acid adenylation. | 0.742 |
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