Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_2154 | Ava_2863 | Ava_2154 | Ava_2863 | Conserved hypothetical protein. | Precorrin-3 methyltransferase. | 0.409 |
Ava_2154 | Ava_4153 | Ava_2154 | Ava_4153 | Conserved hypothetical protein. | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | 0.660 |
Ava_2154 | Ava_4637 | Ava_2154 | Ava_4637 | Conserved hypothetical protein. | Thioredoxin reductase. | 0.475 |
Ava_2154 | ribBA | Ava_2154 | Ava_3515 | Conserved hypothetical protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.432 |
Ava_2863 | Ava_2154 | Ava_2863 | Ava_2154 | Precorrin-3 methyltransferase. | Conserved hypothetical protein. | 0.409 |
Ava_2863 | Ava_4153 | Ava_2863 | Ava_4153 | Precorrin-3 methyltransferase. | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | 0.409 |
Ava_4153 | Ava_2154 | Ava_4153 | Ava_2154 | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | Conserved hypothetical protein. | 0.660 |
Ava_4153 | Ava_2863 | Ava_4153 | Ava_2863 | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | Precorrin-3 methyltransferase. | 0.409 |
Ava_4153 | Ava_4154 | Ava_4153 | Ava_4154 | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | ABC transporter, substrate-binding protein, aliphatic sulfonates. | 0.705 |
Ava_4153 | Ava_4637 | Ava_4153 | Ava_4637 | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | Thioredoxin reductase. | 0.405 |
Ava_4153 | ribBA | Ava_4153 | Ava_3515 | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.432 |
Ava_4154 | Ava_4153 | Ava_4154 | Ava_4153 | ABC transporter, substrate-binding protein, aliphatic sulfonates. | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | 0.705 |
Ava_4637 | Ava_2154 | Ava_4637 | Ava_2154 | Thioredoxin reductase. | Conserved hypothetical protein. | 0.475 |
Ava_4637 | Ava_4153 | Ava_4637 | Ava_4153 | Thioredoxin reductase. | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | 0.405 |
ribBA | Ava_2154 | Ava_3515 | Ava_2154 | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Conserved hypothetical protein. | 0.432 |
ribBA | Ava_4153 | Ava_3515 | Ava_4153 | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | 0.432 |