node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_0169 | Ava_0781 | Ava_0169 | Ava_0781 | Phosphoribulokinase/uridine kinase. | Phosphoribulokinase. | 0.917 |
Ava_0169 | Ava_4238 | Ava_0169 | Ava_4238 | Phosphoribulokinase/uridine kinase. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | 0.680 |
Ava_0781 | Ava_0169 | Ava_0781 | Ava_0169 | Phosphoribulokinase. | Phosphoribulokinase/uridine kinase. | 0.917 |
Ava_0781 | Ava_4238 | Ava_0781 | Ava_4238 | Phosphoribulokinase. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | 0.680 |
Ava_1171 | Ava_4238 | Ava_1171 | Ava_4238 | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | 0.835 |
Ava_4238 | Ava_0169 | Ava_4238 | Ava_0169 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | Phosphoribulokinase/uridine kinase. | 0.680 |
Ava_4238 | Ava_0781 | Ava_4238 | Ava_0781 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | Phosphoribulokinase. | 0.680 |
Ava_4238 | Ava_1171 | Ava_4238 | Ava_1171 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.835 |
Ava_4238 | rplB | Ava_4238 | Ava_0694 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.599 |
Ava_4238 | rplF | Ava_4238 | Ava_0705 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.704 |
Ava_4238 | rplM | Ava_4238 | Ava_0718 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.564 |
Ava_4238 | rplP | Ava_4238 | Ava_0698 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.598 |
Ava_4238 | rplQ | Ava_4238 | Ava_0716 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | LSU ribosomal protein L17P. | 0.592 |
Ava_4238 | rplV | Ava_4238 | Ava_0696 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.600 |
Ava_4238 | rpmA | Ava_4238 | Ava_1515 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.564 |
rplB | Ava_4238 | Ava_0694 | Ava_4238 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | 0.599 |
rplB | rplF | Ava_0694 | Ava_0705 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
rplB | rplM | Ava_0694 | Ava_0718 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplB | rplP | Ava_0694 | Ava_0698 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
rplB | rplQ | Ava_0694 | Ava_0716 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L17P. | 0.998 |