STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ava_5014ABC-type phosphate/phosphonate transport system periplasmic component-like protein. (266 aa)    
Predicted Functional Partners:
Ava_5013
Hypothetical protein.
       0.773
phnC
ABC transporter-like protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
  
 0.699
Ava_5015
Conserved hypothetical protein.
  
     0.686
Ava_4036
Prolyl 4-hydroxylase, alpha subunit.
  
     0.576
Ava_4025
Molybdenum ABC transporter, periplasmic molybdenum-binding protein, putative.
  
     0.545
Ava_3191
Conserved hypothetical protein.
   
    0.470
Ava_4038
ABC transporter-like protein.
  
     0.438
Ava_4058
Molybdenum ABC transporter, periplasmic binding protein.
  
     0.432
Ava_5012
ABC transporter, substrate-binding protein, aliphatic sulfonates.
  
    0.429
Your Current Organism:
Trichormus variabilis
NCBI taxonomy Id: 240292
Other names: Anabaena flos-aquae A-37, Anabaena flos-aquae UTCC 67, Anabaena sp. CCALA 007, Anabaena sp. PCC 7937, Anabaena variabilis ATCC 29413, Anabaena variabilis IAM M-204, Anabaena variabilis NIES-2095, Anabaena variabilis UTCC 105, Nostoc sp. PCC 7937, T. variabilis ATCC 29413, Trichormus variabilis ATCC 29413
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