Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CDQ17912.1Patatin. (322 aa)    
Predicted Functional Partners:
sspI
Small, acid-soluble spore protein I; Belongs to the SspI family.
  
     0.635
mntR
Manganese transport regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.
       0.620
CDQ19489.1
Hypothetical protein.
  
     0.579
CDQ21203.1
Putative amidase domain protein.
  
     0.579
ydcC
Sporulation protein YdcC.
  
     0.576
rsfA_1
Prespore-specific transcriptional regulator RsfA.
  
     0.556
gerD
Spore germination protein GerD precursor.
  
     0.555
spoIIIAH
Stage III sporulation protein AH.
  
     0.545
CDQ17921.1
Bacterial protein YqhG of unknown function.
  
     0.524
CDQ20321.1
Type IV secretion system protein VirD4.
    
   0.510
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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