STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ17939.1Phage tail protein. (279 aa)    
Predicted Functional Partners:
CDQ19738.1
Flagellar basal body rod modification protein.
  
  
 0.874
flgK
Flagellar hook-associated protein 1.
  
  
 0.870
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.870
flgC
Putative proximal rod protein; Belongs to the flagella basal body rod proteins family.
  
  
 0.865
fliF
Flagellar M-ring protein.
  
  
 0.818
cwlC_2
Sporulation-specific N-acetylmuramoyl-L-alanine amidase.
  
 
 0.814
lytC_3
N-acetylmuramoyl-L-alanine amidase LytC precursor.
  
 
 0.813
CDQ19739.1
Flagellar hook-length control protein FliK.
  
  
 0.779
CDQ17940.1
Phage tail tape measure protein, TP901 family, core region.
       0.763
CDQ17938.1
Hypothetical protein.
       0.746
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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