STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ17954.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
CDQ17951.1
Phage terminase-like protein, large subunit.
       0.773
CDQ17952.1
Phage terminase, small subunit.
       0.773
CDQ17953.1
HNH endonuclease.
       0.773
clpP_1
ATP-dependent Clp protease proteolytic subunit.
       0.768
CDQ17950.1
Phage portal protein, HK97 family.
       0.768
CDQ17948.1
Phage major capsid protein, HK97 family.
       0.717
CDQ17944.1
Hypothetical protein.
       0.697
CDQ17945.1
Phage protein, HK97 gp10 family.
       0.697
CDQ17946.1
Hypothetical protein.
       0.697
CDQ17947.1
Hypothetical protein.
       0.697
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.