recO protein (Halobacillus dabanensis) - STRING interaction network

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Score

recO

Recombination protein O; Involved in DNA repair and RecF pathway recombination. (248 aa)

Predicted Functional Partners:

recR

0.988

era

0.841

ybeZ

0.819

recF

0.755

CDQ18034.1

0.732

CDQ19581.1

0.695

CDQ18058.1

0.648

dgkA

0.642

ssb

0.636

topA

0.612

Your Current Organism:

Halobacillus dabanensis

NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDQ18034.1	dgkA	BN982_00280	BN982_00282	Hypothetical protein.	Undecaprenol kinase.	0.400
CDQ18034.1	era	BN982_00280	BN982_00281	Hypothetical protein.	Bex protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.533
CDQ18034.1	recO	BN982_00280	BN982_00279	Hypothetical protein.	Recombination protein O; Involved in DNA repair and RecF pathway recombination.	0.732
CDQ18058.1	recF	BN982_00304	BN982_00657	DNA polymerase III subunit delta.	DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.	0.417
CDQ18058.1	recO	BN982_00304	BN982_00279	DNA polymerase III subunit delta.	Recombination protein O; Involved in DNA repair and RecF pathway recombination.	0.648
CDQ18058.1	recR	BN982_00304	BN982_00622	DNA polymerase III subunit delta.	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	0.452
CDQ19581.1	dgkA	BN982_01879	BN982_00282	GTPase Era.	Undecaprenol kinase.	0.459
CDQ19581.1	recO	BN982_01879	BN982_00279	GTPase Era.	Recombination protein O; Involved in DNA repair and RecF pathway recombination.	0.695
CDQ19581.1	topA	BN982_01879	BN982_02055	GTPase Era.	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.550
CDQ19581.1	ybeZ	BN982_01879	BN982_00284	GTPase Era.	PhoH-like protein.	0.566
dgkA	CDQ18034.1	BN982_00282	BN982_00280	Undecaprenol kinase.	Hypothetical protein.	0.400
dgkA	CDQ19581.1	BN982_00282	BN982_01879	Undecaprenol kinase.	GTPase Era.	0.459
dgkA	era	BN982_00282	BN982_00281	Undecaprenol kinase.	Bex protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.807
dgkA	recO	BN982_00282	BN982_00279	Undecaprenol kinase.	Recombination protein O; Involved in DNA repair and RecF pathway recombination.	0.642
dgkA	ybeZ	BN982_00282	BN982_00284	Undecaprenol kinase.	PhoH-like protein.	0.556
era	CDQ18034.1	BN982_00281	BN982_00280	Bex protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Hypothetical protein.	0.533
era	dgkA	BN982_00281	BN982_00282	Bex protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Undecaprenol kinase.	0.807
era	recO	BN982_00281	BN982_00279	Bex protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Recombination protein O; Involved in DNA repair and RecF pathway recombination.	0.841
era	topA	BN982_00281	BN982_02055	Bex protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.464
era	ybeZ	BN982_00281	BN982_00284	Bex protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	PhoH-like protein.	0.707