Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CDQ18153.1D-threonine aldolase. (363 aa)    
Predicted Functional Partners:
dan
D-aminoacylase.
 
   
 0.897
CDQ18151.1
Putative endoribonuclease L-PSP.
 
   
 0.856
panF_1
Pantothenate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.746
csd
Putative cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
  0.611
purD
Phosphoribosylamine--glycine ligase.
     
  0.603
CDQ18588.1
Aspartate racemase.
  
  
  0.567
CDQ18425.1
Soluble hydrogenase 42 kDa subunit.
    
  0.551
CDQ18155.1
YheO-like PAS domain protein.
       0.531
thrC_3
Threonine synthase.
 
  
  0.518
aceB
Malate synthase A; Belongs to the malate synthase family.
     
  0.510
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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