Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ18189.1 | ccsA_1 | BN982_00443 | BN982_00445 | uroporphyrinogen-III synthase. | Cytochrome c biogenesis protein CcsA. | 0.928 |
CDQ18189.1 | hemA | BN982_00443 | BN982_00446 | uroporphyrinogen-III synthase. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.970 |
CDQ18189.1 | hemB | BN982_00443 | BN982_00442 | uroporphyrinogen-III synthase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.997 |
CDQ18189.1 | hemC | BN982_00443 | BN982_00444 | uroporphyrinogen-III synthase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.999 |
CDQ18189.1 | hemE | BN982_00443 | BN982_03458 | uroporphyrinogen-III synthase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.860 |
CDQ18189.1 | hemL1 | BN982_00443 | BN982_02706 | uroporphyrinogen-III synthase. | Glutamate-1-semialdehyde 2,1-aminomutase 1. | 0.844 |
CDQ18189.1 | hemL_1 | BN982_00443 | BN982_00441 | uroporphyrinogen-III synthase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.951 |
CDQ18189.1 | sirC | BN982_00443 | BN982_02088 | uroporphyrinogen-III synthase. | Precorrin-2 dehydrogenase. | 0.837 |
CDQ18189.1 | sumT_1 | BN982_00443 | BN982_02090 | uroporphyrinogen-III synthase. | Uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.994 |
CDQ18189.1 | sumT_2 | BN982_00443 | BN982_03092 | uroporphyrinogen-III synthase. | Uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.994 |
ccsA_1 | CDQ18189.1 | BN982_00445 | BN982_00443 | Cytochrome c biogenesis protein CcsA. | uroporphyrinogen-III synthase. | 0.928 |
ccsA_1 | hemA | BN982_00445 | BN982_00446 | Cytochrome c biogenesis protein CcsA. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.924 |
ccsA_1 | hemB | BN982_00445 | BN982_00442 | Cytochrome c biogenesis protein CcsA. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.854 |
ccsA_1 | hemC | BN982_00445 | BN982_00444 | Cytochrome c biogenesis protein CcsA. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.896 |
ccsA_1 | hemL_1 | BN982_00445 | BN982_00441 | Cytochrome c biogenesis protein CcsA. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.727 |
ccsA_1 | sumT_1 | BN982_00445 | BN982_02090 | Cytochrome c biogenesis protein CcsA. | Uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.479 |
ccsA_1 | sumT_2 | BN982_00445 | BN982_03092 | Cytochrome c biogenesis protein CcsA. | Uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.479 |
hemA | CDQ18189.1 | BN982_00446 | BN982_00443 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | uroporphyrinogen-III synthase. | 0.970 |
hemA | ccsA_1 | BN982_00446 | BN982_00445 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Cytochrome c biogenesis protein CcsA. | 0.924 |
hemA | hemB | BN982_00446 | BN982_00442 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.958 |
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