Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDQ18340.1Putative small secreted protein. (105 aa)    
Predicted Functional Partners:
CDQ19463.1
Hypothetical protein.
  
     0.740
mreD
Rod shape-determining protein MreD.
  
     0.712
divIC
Cell division protein DivIC.
  
     0.709
CDQ19632.1
Hypothetical protein.
  
    0.659
CDQ18081.1
Hypothetical protein.
  
     0.634
CDQ18308.1
DNA methylase.
  
     0.629
ezrA
Septation ring formation regulator EzrA.
  
     0.593
ysdC_2
Putative aminopeptidase YsdC.
       0.579
CDQ21016.1
Protein-disulfide isomerase.
  
     0.578
CDQ19507.1
Tetratricopeptide repeat protein.
  
     0.575
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.