Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ytzEPutative HTH-type transcriptional regulator YtzE. (72 aa)    
Predicted Functional Partners:
fruA_1
EIIABC-Fru.
  
  
 0.812
CDQ19887.1
Hypothetical protein.
  
     0.734
ppnK
Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
 
  0.714
ppnK1
Putative inorganic polyphosphate/ATP-NAD kinase 1; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
 
  0.707
rsiX
Sigma-X negative effector.
  
     0.692
CDQ18345.1
Hypothetical protein.
 
     0.676
CDQ19489.1
Hypothetical protein.
  
     0.618
CDQ20376.1
Hypothetical protein.
  
     0.600
CDQ21016.1
Protein-disulfide isomerase.
  
     0.594
CDQ18334.1
Hypothetical protein; Belongs to the UPF0354 family.
  
     0.589
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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