STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
modAMolybdate-binding periplasmic protein precursor. (260 aa)    
Predicted Functional Partners:
modB
Molybdenum transport system permease protein ModB.
 
 
 0.999
moeA
Molybdopterin molybdenumtransferase.
 
  
 0.970
moaB
Molybdenum cofactor biosynthesis protein B.
 
  
 0.891
mobA
Molybdenum cofactor guanylyltransferase.
 
  
 0.866
moaC
Molybdenum cofactor biosynthesis protein C.
 
   
 0.842
mobB
Molybdopterin-guanine dinucleotide biosynthesis protein B.
 
  
 0.827
moaA
Cyclic pyranopterin monophosphate synthase.
 
   
 0.824
cysA_2
Sulfate/thiosulfate import ATP-binding protein CysA.
    
 0.747
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
    
 0.723
malK
Maltose/maltodextrin import ATP-binding protein MalK.
    
  0.717
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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