Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ18447.1 | alsT_1 | BN982_00719 | BN982_00716 | Hypothetical protein. | Amino-acid carrier protein AlsT. | 0.482 |
CDQ18447.1 | ltaA_1 | BN982_00719 | BN982_00717 | Hypothetical protein. | L-allo-threonine aldolase. | 0.727 |
CDQ18447.1 | ltaA_2 | BN982_00719 | BN982_00718 | Hypothetical protein. | L-allo-threonine aldolase. | 0.773 |
alsT_1 | CDQ18447.1 | BN982_00716 | BN982_00719 | Amino-acid carrier protein AlsT. | Hypothetical protein. | 0.482 |
alsT_1 | ltaA_1 | BN982_00716 | BN982_00717 | Amino-acid carrier protein AlsT. | L-allo-threonine aldolase. | 0.508 |
alsT_1 | ltaA_2 | BN982_00716 | BN982_00718 | Amino-acid carrier protein AlsT. | L-allo-threonine aldolase. | 0.482 |
alsT_1 | purD | BN982_00716 | BN982_02967 | Amino-acid carrier protein AlsT. | Phosphoribosylamine--glycine ligase. | 0.466 |
ltaA_1 | CDQ18447.1 | BN982_00717 | BN982_00719 | L-allo-threonine aldolase. | Hypothetical protein. | 0.727 |
ltaA_1 | alsT_1 | BN982_00717 | BN982_00716 | L-allo-threonine aldolase. | Amino-acid carrier protein AlsT. | 0.508 |
ltaA_1 | ltaA_2 | BN982_00717 | BN982_00718 | L-allo-threonine aldolase. | L-allo-threonine aldolase. | 0.993 |
ltaA_2 | CDQ18447.1 | BN982_00718 | BN982_00719 | L-allo-threonine aldolase. | Hypothetical protein. | 0.773 |
ltaA_2 | alsT_1 | BN982_00718 | BN982_00716 | L-allo-threonine aldolase. | Amino-acid carrier protein AlsT. | 0.482 |
ltaA_2 | ltaA_1 | BN982_00718 | BN982_00717 | L-allo-threonine aldolase. | L-allo-threonine aldolase. | 0.993 |
purD | alsT_1 | BN982_02967 | BN982_00716 | Phosphoribosylamine--glycine ligase. | Amino-acid carrier protein AlsT. | 0.466 |