STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ18509.1Lantibiotic protection ABC transporter permease subunit, MutG family. (249 aa)    
Predicted Functional Partners:
ybhF_2
Putative ABC transporter ATP-binding protein YbhF.
  
  0.928
phoR_2
Alkaline phosphatase synthesis sensor protein PhoR.
  
    0.747
CDQ21253.1
Fluoroquinolones export ATP-binding proteinc/MT2762.
  
  0.695
yxlF
Putative ABC transporter ATP-binding protein YxlF.
  
  0.695
ybhF_1
Putative ABC transporter ATP-binding protein YbhF.
  
  0.694
ecsA_1
ABC-type transporter ATP-binding protein EcsA.
  
  0.694
livF
LIV-I protein F.
  
  0.694
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
  0.694
ybhF_3
Putative ABC transporter ATP-binding protein YbhF.
  
  0.694
skfE
SkfA peptide export ATP-binding protein SkfE.
  
  0.694
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.