STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltaS1_2Lipoteichoic acid synthase 1; Belongs to the LTA synthase family. (636 aa)    
Predicted Functional Partners:
ltaS1_1
Lipoteichoic acid synthase 1; Belongs to the LTA synthase family.
  
  
 
0.920
ltaS1_3
Lipoteichoic acid synthase 1; Belongs to the LTA synthase family.
  
  
 
0.790
CDQ18308.1
DNA methylase.
  
     0.691
CDQ18233.1
Hypothetical protein.
  
     0.611
CDQ19507.1
Tetratricopeptide repeat protein.
 
    0.568
CDQ19566.1
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.518
ugtP
Processive diacylglycerol glucosyltransferase.
  
 
 0.498
CDQ17995.1
Hypothetical protein.
 
     0.468
CDQ20349.1
Exosortase E/protease, VPEID-CTERM system.
  
     0.448
CDQ20360.1
Hypothetical protein.
  
     0.442
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.