STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nprA_1Transcriptional activator NprA. (423 aa)    
Predicted Functional Partners:
nprA_2
Transcriptional activator NprA.
  
  
 
0.895
cinA
Exported protein 10.
    
 0.717
spo0F
Sporulation initiation phosphotransferase F.
    
 0.682
CDQ21107.1
Gas vesicle protein.
  
     0.595
CDQ18201.1
Hypothetical protein.
  
     0.560
CDQ21132.1
Hypothetical protein.
  
     0.556
CDQ20476.1
Flagellin N-methylase.
  
     0.540
CDQ18386.1
Hypothetical protein.
  
     0.531
CDQ18860.1
Hypothetical protein; Putative transcriptional regulator with C-terminal CBS domains.
  
     0.527
CDQ20533.1
DNA binding domain, excisionase family.
  
     0.525
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.