Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
crr_1 | crr_2 | BN982_00948 | BN982_00994 | Glucose-specific phosphotransferase enzyme IIA component. | Glucose-specific phosphotransferase enzyme IIA component. | 0.794 |
crr_1 | fruA_1 | BN982_00948 | BN982_01568 | Glucose-specific phosphotransferase enzyme IIA component. | EIIABC-Fru. | 0.951 |
crr_1 | glcK | BN982_00948 | BN982_00234 | Glucose-specific phosphotransferase enzyme IIA component. | Glucokinase. | 0.802 |
crr_1 | licR | BN982_00948 | BN982_03044 | Glucose-specific phosphotransferase enzyme IIA component. | Putative licABCH operon regulator. | 0.559 |
crr_1 | nagC_1 | BN982_00948 | BN982_01292 | Glucose-specific phosphotransferase enzyme IIA component. | N-acetylglucosamine repressor. | 0.655 |
crr_1 | ptsG_1 | BN982_00948 | BN982_02721 | Glucose-specific phosphotransferase enzyme IIA component. | EIICBA-Glc. | 0.984 |
crr_1 | treA | BN982_00948 | BN982_00950 | Glucose-specific phosphotransferase enzyme IIA component. | Trehalose-6-phosphate hydrolase. | 0.921 |
crr_1 | treB | BN982_00948 | BN982_00949 | Glucose-specific phosphotransferase enzyme IIA component. | EIIBC-Tre. | 0.999 |
crr_2 | crr_1 | BN982_00994 | BN982_00948 | Glucose-specific phosphotransferase enzyme IIA component. | Glucose-specific phosphotransferase enzyme IIA component. | 0.794 |
crr_2 | fruA_1 | BN982_00994 | BN982_01568 | Glucose-specific phosphotransferase enzyme IIA component. | EIIABC-Fru. | 0.951 |
crr_2 | glcK | BN982_00994 | BN982_00234 | Glucose-specific phosphotransferase enzyme IIA component. | Glucokinase. | 0.920 |
crr_2 | licR | BN982_00994 | BN982_03044 | Glucose-specific phosphotransferase enzyme IIA component. | Putative licABCH operon regulator. | 0.559 |
crr_2 | nagC_1 | BN982_00994 | BN982_01292 | Glucose-specific phosphotransferase enzyme IIA component. | N-acetylglucosamine repressor. | 0.655 |
crr_2 | ptsG_1 | BN982_00994 | BN982_02721 | Glucose-specific phosphotransferase enzyme IIA component. | EIICBA-Glc. | 0.993 |
crr_2 | treA | BN982_00994 | BN982_00950 | Glucose-specific phosphotransferase enzyme IIA component. | Trehalose-6-phosphate hydrolase. | 0.917 |
crr_2 | treB | BN982_00994 | BN982_00949 | Glucose-specific phosphotransferase enzyme IIA component. | EIIBC-Tre. | 0.999 |
fruA_1 | crr_1 | BN982_01568 | BN982_00948 | EIIABC-Fru. | Glucose-specific phosphotransferase enzyme IIA component. | 0.951 |
fruA_1 | crr_2 | BN982_01568 | BN982_00994 | EIIABC-Fru. | Glucose-specific phosphotransferase enzyme IIA component. | 0.951 |
fruA_1 | glcK | BN982_01568 | BN982_00234 | EIIABC-Fru. | Glucokinase. | 0.891 |
fruA_1 | licR | BN982_01568 | BN982_03044 | EIIABC-Fru. | Putative licABCH operon regulator. | 0.983 |
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