STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ18701.1Ubiquinone biosynthesis hydroxylase family protein. (406 aa)    
Predicted Functional Partners:
puuB
Gamma-glutamylputrescine oxidoreductase.
  
 
 0.854
etfB_1
Electron transfer flavoprotein small subunit.
  
 
 0.811
etfB_2
Electron transfer flavoprotein small subunit.
  
 
 0.811
etfB_3
Electron transfer flavoprotein small subunit.
  
 
 0.811
crtM
Dehydrosqualene synthase.
  
 
 0.684
hepT
Heptaprenyl diphosphate synthase component 2; Belongs to the FPP/GGPP synthase family.
  
 0.681
CDQ17891.1
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.677
CDQ18702.1
Hypothetical protein.
       0.668
des
Fatty acid desaturase.
   
 
 0.661
etfA_1
Electron transfer flavoprotein large subunit.
  
 
 0.622
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.