STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ18752.1Sulfite exporter TauE/SafE. (295 aa)    
Predicted Functional Partners:
CDQ18751.1
Hypothetical protein.
       0.554
CDQ19461.1
Hypothetical protein.
  
     0.483
CDQ18713.1
Transcriptional regulator SlyA.
  
     0.447
paiB
Protease synthase and sporulation protein PAI 2.
  
     0.427
ftsK
DNA translocase FtsK.
  
     0.423
phnD
Phosphate-import protein PhnD precursor.
  
   
 0.416
sumT_1
Uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
    
  0.404
sumT_2
Uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
    
  0.404
CDQ20587.1
Hypothetical protein.
  
     0.402
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.