murJ protein (Halobacillus dabanensis) - STRING interaction network

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Predicted Interactions

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murJ

Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (504 aa)

Predicted Functional Partners:

CDQ18939.1

0.804

tuaC

0.768

ftsW_3

0.530

ftsW_1

0.511

icaC

0.505

ftsW_2

0.470

slt

0.459

cap8A

0.444

mrdB

0.432

rodA

0.431

Your Current Organism:

Halobacillus dabanensis

NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDQ18939.1	icaC	BN982_01220	BN982_01218	Glucosamine-6-phosphate deaminase-like protein.	Intercellular adhesion protein C.	0.505
CDQ18939.1	murJ	BN982_01220	BN982_01219	Glucosamine-6-phosphate deaminase-like protein.	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	0.804
CDQ18939.1	tuaC	BN982_01220	BN982_01221	Glucosamine-6-phosphate deaminase-like protein.	Putative teichuronic acid biosynthesis glycosyltransferase TuaC.	0.856
cap8A	murJ	BN982_01222	BN982_01219	Capsular polysaccharide type 8 biosynthesis protein cap8A.	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	0.444
cap8A	tuaC	BN982_01222	BN982_01221	Capsular polysaccharide type 8 biosynthesis protein cap8A.	Putative teichuronic acid biosynthesis glycosyltransferase TuaC.	0.460
ftsW_1	murJ	BN982_00021	BN982_01219	Cell division protein FtsW; Belongs to the SEDS family.	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	0.511
ftsW_2	murJ	BN982_02146	BN982_01219	Cell division protein FtsW; Belongs to the SEDS family.	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	0.470
ftsW_3	mrdB	BN982_03313	BN982_03314	Cell division protein FtsW.	Rod shape-determining protein RodA.	0.787
ftsW_3	murJ	BN982_03313	BN982_01219	Cell division protein FtsW.	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	0.530
icaC	CDQ18939.1	BN982_01218	BN982_01220	Intercellular adhesion protein C.	Glucosamine-6-phosphate deaminase-like protein.	0.505
icaC	murJ	BN982_01218	BN982_01219	Intercellular adhesion protein C.	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	0.505
icaC	tuaC	BN982_01218	BN982_01221	Intercellular adhesion protein C.	Putative teichuronic acid biosynthesis glycosyltransferase TuaC.	0.468
mrdB	ftsW_3	BN982_03314	BN982_03313	Rod shape-determining protein RodA.	Cell division protein FtsW.	0.787
mrdB	murJ	BN982_03314	BN982_01219	Rod shape-determining protein RodA.	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	0.432
murJ	CDQ18939.1	BN982_01219	BN982_01220	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	Glucosamine-6-phosphate deaminase-like protein.	0.804
murJ	cap8A	BN982_01219	BN982_01222	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	Capsular polysaccharide type 8 biosynthesis protein cap8A.	0.444
murJ	ftsW_1	BN982_01219	BN982_00021	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	Cell division protein FtsW; Belongs to the SEDS family.	0.511
murJ	ftsW_2	BN982_01219	BN982_02146	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	Cell division protein FtsW; Belongs to the SEDS family.	0.470
murJ	ftsW_3	BN982_01219	BN982_03313	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	Cell division protein FtsW.	0.530
murJ	icaC	BN982_01219	BN982_01218	Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.	Intercellular adhesion protein C.	0.505

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Network Stats

number of nodes:

3

number of edges:

2

average node degree:

1.33

avg. local clustering coefficient:

0.667

expected number of edges:

2

PPI enrichment p-value:

0.531

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0098660

Inorganic ion transmembrane transport

5 of 75

1.48

1.64

4.67e-05

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0046933

Proton-transporting ATP synthase activity, rotational mechanism

4 of 9

2.3

2.78

3.71e-06

GO:0005216

Ion channel activity

5 of 29

1.89

2.47

3.71e-06

GO:0015075

Ion transmembrane transporter activity

6 of 106

1.41

1.76

5.17e-06

GO:0046961

Proton-transporting ATPase activity, rotational mechanism

2 of 2

2.65

1.52

0.0017

GO:0022853

Active ion transmembrane transporter activity

3 of 37

1.56

1.14

0.0032

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016469

Proton-transporting two-sector ATPase complex

5 of 11

2.31

3.91

1.31e-08

GO:0045259

Proton-transporting ATP synthase complex

4 of 10

2.26

3.01

1.06e-06

GO:0045261

Proton-transporting ATP synthase complex, catalytic core F(1)

3 of 5

2.43

2.48e-05

GO:0033177

Proton-transporting two-sector ATPase complex, proton-transporting domain

2 of 6

2.18

1.47

0.0016

GO:0031676

Plasma membrane-derived thylakoid membrane

4 of 98

1.27

1.07

0.0012

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1356

ATP synthesis, and Adenylate kinase activity

4 of 12

2.18

2.34

2.39e-05

CL:1360

ATP synthesis

3 of 7

2.29

1.75

0.00049

CL:3455

Mixed, incl. Cation/H+ exchanger, and Potassium ion transport

3 of 24

1.75

1.05

0.0078

CL:3493

MgtC family, and Cation transporter/ATPase, N-terminus

2 of 5

2.26

1.04

0.0119

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00190

Oxidative phosphorylation

6 of 71

1.58

2.26

6.23e-07

map00195

Photosynthesis

4 of 58

1.49

1.39

0.00043

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0016469

Proton-transporting two-sector ATPase complex

5 of 12

2.27

3.69

3.28e-08

GOCC:0045259

Proton-transporting ATP synthase complex

4 of 11

2.22

2.81

2.57e-06

GOCC:0045261

Proton-transporting ATP synthase complex, catalytic core F(1)

3 of 5

2.43

2.31

4.39e-05

GOCC:0033177

Proton-transporting two-sector ATPase complex, proton-transporting domain

2 of 7

2.11

1.12

0.0078

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0066

ATP synthesis

4 of 9

2.3

2.9

2.12e-06

KW-0375

Hydrogen ion transport

4 of 10

2.26

2.87

2.12e-06

KW-0139

CF(1)

3 of 5

2.43

2.36

3.45e-05

KW-0793

Thylakoid

4 of 79

1.36

1.17

0.0010

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF02874

ATP synthase alpha/beta family, beta-barrel domain

2 of 2

2.65

0.96

0.0181

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036121

ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily

2 of 2

2.65

0.74

0.0456

IPR020003

ATPase, alpha/beta subunit, nucleotide-binding domain, active site

2 of 2

2.65

0.74

0.0456

IPR004100

ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

2 of 2

2.65

0.74

0.0456

IPR000194

ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

2 of 2

2.65

0.74

0.0456

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