STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thlA_2Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)    
Predicted Functional Partners:
fadN
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.998
mmgB_1
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
  0.981
mmgB_4
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
  0.976
bbsG
(R)-benzylsuccinyl-CoA dehydrogenase.
  
  0.953
mmgC_3
Acyl-CoA dehydrogenase.
 
  0.951
mmgB_3
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
  0.951
acdA_2
Acyl-CoA dehydrogenase.
   
  0.947
acsA_1
Acetyl-coenzyme A synthetase.
  
 
 0.942
acs
Acetyl-coenzyme A synthetase.
  
 
 0.942
acsA_2
Acetyl-coenzyme A synthetase.
  
 
 0.942
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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