Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lcfB_2Long-chain-fatty-acid--CoA ligase. (534 aa)    
Predicted Functional Partners:
mmgB_2
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
 
  0.820
mmgC_6
Acyl-CoA dehydrogenase.
  
 
  0.814
acpA
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.810
etfA_2
Electron transfer flavoprotein large subunit.
  
 
  0.770
fabD
Malonyl CoA-acyl carrier protein transacylase.
   
 0.760
mmgB_3
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
 
  0.757
etfB_2
Electron transfer flavoprotein small subunit.
  
    0.740
echA8_1
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.733
fadN
Putative 3-hydroxyacyl-CoA dehydrogenase.
 
 0.729
thlA_3
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.662
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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