STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
thlA_3Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)    
Predicted Functional Partners:
fadN
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.992
mmgB_3
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.959
mmgB_1
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.954
mmgB_4
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
 0.942
mmgB_2
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.940
echA8_1
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.939
mmgC_6
Acyl-CoA dehydrogenase.
  
  0.884
acdA_2
Acyl-CoA dehydrogenase.
   
  0.875
mmgC_1
Acyl-CoA dehydrogenase.
   
  0.863
mmgC_3
Acyl-CoA dehydrogenase.
   
  0.863
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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