Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ19089.1 | CDQ19092.1 | BN982_01372 | BN982_01375 | Hypothetical protein. | Hypothetical protein. | 0.409 |
CDQ19089.1 | sipW | BN982_01372 | BN982_01373 | Hypothetical protein. | Signal peptidase I W. | 0.693 |
CDQ19089.1 | tasA | BN982_01372 | BN982_01374 | Hypothetical protein. | Spore coat-associated protein N precursor. | 0.519 |
CDQ19092.1 | CDQ19089.1 | BN982_01375 | BN982_01372 | Hypothetical protein. | Hypothetical protein. | 0.409 |
CDQ19092.1 | CDQ19093.1 | BN982_01375 | BN982_01376 | Hypothetical protein. | Sortase. | 0.671 |
CDQ19092.1 | sipW | BN982_01375 | BN982_01373 | Hypothetical protein. | Signal peptidase I W. | 0.507 |
CDQ19092.1 | tasA | BN982_01375 | BN982_01374 | Hypothetical protein. | Spore coat-associated protein N precursor. | 0.617 |
CDQ19093.1 | CDQ19092.1 | BN982_01376 | BN982_01375 | Sortase. | Hypothetical protein. | 0.671 |
CDQ19093.1 | sipW | BN982_01376 | BN982_01373 | Sortase. | Signal peptidase I W. | 0.533 |
CDQ19093.1 | tasA | BN982_01376 | BN982_01374 | Sortase. | Spore coat-associated protein N precursor. | 0.541 |
sipW | CDQ19089.1 | BN982_01373 | BN982_01372 | Signal peptidase I W. | Hypothetical protein. | 0.693 |
sipW | CDQ19092.1 | BN982_01373 | BN982_01375 | Signal peptidase I W. | Hypothetical protein. | 0.507 |
sipW | CDQ19093.1 | BN982_01373 | BN982_01376 | Signal peptidase I W. | Sortase. | 0.533 |
sipW | tasA | BN982_01373 | BN982_01374 | Signal peptidase I W. | Spore coat-associated protein N precursor. | 0.911 |
tasA | CDQ19089.1 | BN982_01374 | BN982_01372 | Spore coat-associated protein N precursor. | Hypothetical protein. | 0.519 |
tasA | CDQ19092.1 | BN982_01374 | BN982_01375 | Spore coat-associated protein N precursor. | Hypothetical protein. | 0.617 |
tasA | CDQ19093.1 | BN982_01374 | BN982_01376 | Spore coat-associated protein N precursor. | Sortase. | 0.541 |
tasA | sipW | BN982_01374 | BN982_01373 | Spore coat-associated protein N precursor. | Signal peptidase I W. | 0.911 |