STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ19141.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
bdbC
Thiol-disulfide oxidoreductase C; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.
  
 
 0.866
CDQ19140.1
Putative membrane protein.
  
  
 0.735
folK
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase.
    
  0.611
CDQ18884.1
Protein-disulfide isomerase.
  
 
 0.530
CDQ21016.1
Protein-disulfide isomerase.
  
 
 0.530
cheC
CheY-P phosphatase CheC.
    
   0.504
fliN
Flagellar motor switch protein FliN.
    
   0.504
CDQ21514.1
Glutaredoxin-like protein, YruB-family.
  
  
 0.468
polA_2
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.457
groL
Stress protein H5; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
 
 0.423
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.