Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nprSStearolysin precursor; Extracellular zinc metalloprotease. (567 aa)    
Predicted Functional Partners:
CDQ19142.1
Zinc carboxypeptidase.
 
     0.819
CDQ20066.1
N-formyl-4-amino-5-aminomethyl-2- methylpyrimidinedeformylase.
      
 0.577
CDQ19077.1
Hypothetical protein.
  
     0.550
bpr
Bacillopeptidase F precursor.
  
  
 0.526
scpA_3
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
      
 0.503
CDQ21271.1
Zinc carboxypeptidase.
  
     0.459
ywaD
Arginyl aminopeptidase.
 
  
 0.450
CDQ21417.1
Hypothetical protein.
  
     0.427
CDQ21049.1
Phosphoglycolate phosphatase.
  
     0.425
isp
Intracellular serine protease; Belongs to the peptidase S8 family.
 
  
 0.424
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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