STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ19157.1Peptidase propeptide and YPEB domain protein. (176 aa)    
Predicted Functional Partners:
arlS
Signal transduction histidine-protein kinase ArlS.
  
  
 0.739
mprA
Mycobacterial persistence regulator A.
  
    0.717
CDQ19158.1
Hypothetical protein.
       0.553
flgK
Flagellar hook-associated protein 1.
    
   0.457
fliM
Flagellar motor switch protein FliM.
    
   0.457
CDQ19738.1
Flagellar basal body rod modification protein.
    
   0.457
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
   0.455
CDQ18860.1
Hypothetical protein; Putative transcriptional regulator with C-terminal CBS domains.
   
    0.439
tlyC
Hemolysin C.
   
    0.439
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.