STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ19204.1DNA utilization protein GntX. (221 aa)    
Predicted Functional Partners:
mfd_1
Transcription-repair-coupling factor.
 
  
 0.932
CDQ19754.1
DNA protecting protein DprA.
 
 
 0.838
CDQ18060.1
ComEC family competence protein.
 
  
 0.830
flgC
Putative proximal rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.818
tyrC
Arogenate dehydrogenase.
   
  
 0.731
nagA
N-acetylglucosamine-6-phosphate deacetylase.
  
    0.731
hemY
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
    0.709
CDQ19740.1
Hypothetical protein.
   
    0.704
flgK
Flagellar hook-associated protein 1.
  
    0.699
CDQ18177.1
DNA repair protein RadC.
  
    0.690
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.