Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ19241.1 | CDQ19242.1 | BN982_01526 | BN982_01527 | Nucleoside recognition. | Nucleoside recognition. | 0.995 |
CDQ19241.1 | CDQ19245.1 | BN982_01526 | BN982_01530 | Nucleoside recognition. | Glycerol-3-phosphate responsive antiterminator; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA. | 0.775 |
CDQ19241.1 | CDQ21216.1 | BN982_01526 | BN982_03582 | Nucleoside recognition. | TraB family protein. | 0.491 |
CDQ19241.1 | dapH_1 | BN982_01526 | BN982_01529 | Nucleoside recognition. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | 0.795 |
CDQ19241.1 | glpF_2 | BN982_01526 | BN982_01531 | Nucleoside recognition. | Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.513 |
CDQ19241.1 | glpK_2 | BN982_01526 | BN982_01532 | Nucleoside recognition. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.513 |
CDQ19241.1 | hprK | BN982_01526 | BN982_01524 | Nucleoside recognition. | HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...] | 0.789 |
CDQ19241.1 | lgt | BN982_01526 | BN982_01525 | Nucleoside recognition. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.822 |
CDQ19241.1 | ppaX | BN982_01526 | BN982_01528 | Nucleoside recognition. | Pyrophosphatase PpaX; Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool. | 0.835 |
CDQ19241.1 | secF | BN982_01526 | BN982_00358 | Nucleoside recognition. | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.507 |
CDQ19242.1 | CDQ19241.1 | BN982_01527 | BN982_01526 | Nucleoside recognition. | Nucleoside recognition. | 0.995 |
CDQ19242.1 | CDQ19245.1 | BN982_01527 | BN982_01530 | Nucleoside recognition. | Glycerol-3-phosphate responsive antiterminator; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA. | 0.775 |
CDQ19242.1 | dapH_1 | BN982_01527 | BN982_01529 | Nucleoside recognition. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | 0.838 |
CDQ19242.1 | glpF_2 | BN982_01527 | BN982_01531 | Nucleoside recognition. | Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.513 |
CDQ19242.1 | glpK_2 | BN982_01527 | BN982_01532 | Nucleoside recognition. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.513 |
CDQ19242.1 | hprK | BN982_01527 | BN982_01524 | Nucleoside recognition. | HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...] | 0.796 |
CDQ19242.1 | lgt | BN982_01527 | BN982_01525 | Nucleoside recognition. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.843 |
CDQ19242.1 | ppaX | BN982_01527 | BN982_01528 | Nucleoside recognition. | Pyrophosphatase PpaX; Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool. | 0.839 |
CDQ19242.1 | secF | BN982_01527 | BN982_00358 | Nucleoside recognition. | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.509 |
CDQ19245.1 | CDQ19241.1 | BN982_01530 | BN982_01526 | Glycerol-3-phosphate responsive antiterminator; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA. | Nucleoside recognition. | 0.775 |
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