Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDQ19294.1Hypothetical protein. (206 aa)    
Predicted Functional Partners:
CDQ18688.1
Hypothetical protein.
  
     0.703
ysdB
Sigma-w pathway protein YsdB.
  
     0.695
CDQ19935.1
Hypothetical protein.
  
     0.680
CDQ18265.1
Hypothetical protein.
  
     0.673
CDQ21065.1
Hypothetical protein.
  
     0.619
CDQ18689.1
Phage shock protein A.
  
     0.617
CDQ18201.1
Hypothetical protein.
  
     0.601
CDQ20446.1
Bifunctional RNase H/acid phosphatase.
  
     0.577
CDQ18850.1
DNA-directed RNA polymerase subunit beta.
  
     0.576
CDQ18003.1
Hypothetical protein.
  
     0.572
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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