Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glpX_2Fructose-1,6-bisphosphatase class 2. (315 aa)    
Predicted Functional Partners:
tkt_1
Transketolase.
   
 0.893
tal_2
Putative transaldolase.
    
 0.868
tkt_2
Transketolase.
   
 0.837
tkt_4
Transketolase.
   
 0.800
ywlF_2
Putative sugar phosphate isomerase YwlF.
  
 
 0.769
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.756
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.745
lacC
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
     
 0.731
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
     
 0.726
fbp
Fructose-1,6-bisphosphatase class 3.
    
  0.724
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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