STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ19489.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
spoIIIAH
Stage III sporulation protein AH.
  
     0.774
CDQ21031.1
Hypothetical protein.
  
     0.769
ydcC
Sporulation protein YdcC.
  
     0.769
sspI
Small, acid-soluble spore protein I; Belongs to the SspI family.
  
     0.767
ytrI
Sporulation membrane protein YtrI.
  
   
 0.761
fliJ
Chemotaxis CheF protein.
  
     0.761
gerQ
Spore coat protein GerQ.
  
    0.757
cotE
Spore coat protein E.
  
     0.755
CDQ19736.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.749
CDQ18345.1
Hypothetical protein.
  
     0.748
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.