Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cccA_1 | ctaC | BN982_00270 | BN982_02186 | Cytochrome c551. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
cccA_1 | ctaD | BN982_00270 | BN982_02185 | Cytochrome c551. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.929 |
cccA_1 | ctaE | BN982_00270 | BN982_02184 | Cytochrome c551. | Cytochrome c oxidase subunit 3. | 0.971 |
cccA_1 | petB | BN982_00270 | BN982_01807 | Cytochrome c551. | Cytochrome b. | 0.984 |
cccA_1 | petC | BN982_00270 | BN982_01805 | Cytochrome c551. | Cytochrome b6-f complex iron-sulfur subunit. | 0.992 |
cccA_1 | puuB | BN982_00270 | BN982_00985 | Cytochrome c551. | Gamma-glutamylputrescine oxidoreductase. | 0.987 |
cccA_1 | qcrB | BN982_00270 | BN982_01806 | Cytochrome c551. | Menaquinol-cytochrome c reductase cytochrome b subunit. | 0.972 |
cccA_1 | qoxB | BN982_00270 | BN982_02424 | Cytochrome c551. | Quinol oxidase subunit 1. | 0.929 |
cccA_1 | qoxC | BN982_00270 | BN982_02423 | Cytochrome c551. | Quinol oxidase subunit 3. | 0.965 |
cccA_2 | ctaC | BN982_01509 | BN982_02186 | Cytochrome c551. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
cccA_2 | ctaD | BN982_01509 | BN982_02185 | Cytochrome c551. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.929 |
cccA_2 | ctaE | BN982_01509 | BN982_02184 | Cytochrome c551. | Cytochrome c oxidase subunit 3. | 0.972 |
cccA_2 | petB | BN982_01509 | BN982_01807 | Cytochrome c551. | Cytochrome b. | 0.984 |
cccA_2 | petC | BN982_01509 | BN982_01805 | Cytochrome c551. | Cytochrome b6-f complex iron-sulfur subunit. | 0.993 |
cccA_2 | puuB | BN982_01509 | BN982_00985 | Cytochrome c551. | Gamma-glutamylputrescine oxidoreductase. | 0.987 |
cccA_2 | qcrB | BN982_01509 | BN982_01806 | Cytochrome c551. | Menaquinol-cytochrome c reductase cytochrome b subunit. | 0.972 |
cccA_2 | qoxB | BN982_01509 | BN982_02424 | Cytochrome c551. | Quinol oxidase subunit 1. | 0.929 |
cccA_2 | qoxC | BN982_01509 | BN982_02423 | Cytochrome c551. | Quinol oxidase subunit 3. | 0.965 |
ctaC | cccA_1 | BN982_02186 | BN982_00270 | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c551. | 0.999 |
ctaC | cccA_2 | BN982_02186 | BN982_01509 | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c551. | 0.999 |
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