STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fhuB_1Iron(III)-hydroxamate import system permease protein FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (674 aa)    
Predicted Functional Partners:
yfmC_2
Ferric-citrate-binding protein.
 
 
 0.991
yusV
Putative siderophore transport system ATP-binding protein YusV.
 
 0.982
hmuV
Hemin import ATP-binding protein HmuV.
 
 0.979
yfiY
Putative siderophore-binding lipoprotein YfiY precursor.
 
 0.945
yfmC_1
Ferric-citrate-binding protein.
 
 
 0.930
btuF_1
Vitamin B12-binding protein precursor.
 
 0.925
btuF_2
Vitamin B12-binding protein precursor.
 
 0.891
feuB_2
Iron-uptake system permease protein FeuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
0.809
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
  
 
 0.728
CDQ20100.1
Secondary thiamine-phosphate synthase enzyme.
       0.427
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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