STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDQ20132.1Putative integral membrane protein. (212 aa)    
Predicted Functional Partners:
araN
Putative arabinose-binding protein precursor.
 
     0.809
araP_2
L-arabinose transport system permease protein AraP.
 
    0.730
araQ_3
L-arabinose transport system permease protein AraQ.
 
    0.668
abfA
Intracellular exo-alpha-(1->5)-L-arabinofuranosidase.
 
     0.610
CDQ20706.1
ABC transporter efflux protein, DrrB family.
  
     0.582
CDQ20707.1
ABC-2 type transporter, NodJ family.
  
     0.546
egsA
Glycerol-1-phosphate dehydrogenase [NAD(P)+].
 
    0.526
abf2
Intracellular exo-alpha-L-arabinofuranosidase 2.
 
     0.517
fosB
Metallothiol transferase FosB; Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor. Belongs to the fosfomycin resistance protein family. FosB subfamily.
  
     0.487
CDQ20597.1
Hypothetical protein.
  
     0.457
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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