STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
araNPutative arabinose-binding protein precursor. (443 aa)    
Predicted Functional Partners:
araP_2
L-arabinose transport system permease protein AraP.
 
 0.973
araQ_3
L-arabinose transport system permease protein AraQ.
 
 0.967
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
 0.953
abfA
Intracellular exo-alpha-(1->5)-L-arabinofuranosidase.
 
  
 0.952
egsA
Glycerol-1-phosphate dehydrogenase [NAD(P)+].
 
  
 0.929
lacF
Lactose transport system permease protein LacF.
 
 0.898
araP_1
L-arabinose transport system permease protein AraP.
 
 0.888
araQ_2
L-arabinose transport system permease protein AraQ.
 
 0.881
araQ_1
L-arabinose transport system permease protein AraQ.
 
 0.875
malF
Maltose transport system permease protein MalF.
 
  0.863
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
Server load: low (36%) [HD]