STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDQ20167.12-acyl-glycerophospho-ethanolamine acyltransferase. (411 aa)    
Predicted Functional Partners:
CDQ18408.1
H+ Antiporter protein.
  
     0.596
CDQ19395.1
Hypothetical protein.
  
     0.528
CDQ20289.1
Hypothetical protein.
  
     0.526
hom_2
Homoserine dehydrogenase.
   
  0.513
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.490
pabB
Para-aminobenzoate synthase component 1.
   
 
 0.466
czrA_1
HTH-type transcriptional repressor CzrA.
 
     0.456
CDQ21051.1
Hypothetical protein.
  
     0.442
CDQ20635.1
Putative conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
    0.406
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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