Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CDQ20186.1Putative membrane protein. (170 aa)    
Predicted Functional Partners:
CDQ20187.1
Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG).
 
     0.962
cypC
Fatty-acid peroxygenase.
  
     0.658
ydbD_3
Putative manganese catalase.
 
     0.657
ydbD_2
Putative manganese catalase.
 
     0.603
CDQ21408.1
Hypothetical protein.
  
     0.588
ydbD_4
Putative manganese catalase.
 
     0.578
CDQ21245.1
Hypothetical protein.
 
     0.518
CDQ21143.1
Hydroxyacylglutathione hydrolase.
  
     0.512
CDQ18372.1
Hypothetical protein.
  
     0.449
CDQ20726.1
Hypothetical protein.
  
     0.427
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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