Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kdgK_22-dehydro-3-deoxygluconokinase. (316 aa)    
Predicted Functional Partners:
kdgA_2
KHG/KDPG aldolase.
 
 0.898
fruA_1
EIIABC-Fru.
    
 0.864
kdgA_1
KHG/KDPG aldolase.
 
 0.863
kdgA_3
KHG/KDPG aldolase.
 
 0.861
iolB
5-deoxy-glucuronate isomerase; Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D-gluconate).
 
 0.822
rpiA_2
Ribose-5-phosphate isomerase A.
    
 0.815
uxuA
Mannonate dehydratase.
 
  
 0.786
hprA
Glycerate dehydrogenase.
 
  
  0.782
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
 0.775
dgoD
D-galactonate dehydratase.
 
  
  0.688
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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